Deer may be just a reservoir of ancient coronavirus variants, study finds

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Even after Delta was the dominant variant in humans, Alpha and Gamma continued to circulate in white-tailed deer, according to new research.

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By Émilie Anthès

Alpha and gamma variants of the coronavirus continued and evolved in white-tailed deer, even after they stopped spreading widely among humans, according to a new study.

It is not known if the variants are still circulating in deer. “That’s the big question,” said Dr. Diego Diel, a virologist at Cornell University and of the study, which was published Tuesday in the Proceedings of the National Academy of Sciences.

But the findings, which are based on samples collected through December 2021, provide further evidence that deer may just be a reservoir of the virus and a potential source of long-term variants, which may have an effect on human populations.

“This is a population of wild animals in North America that has constant and very intense contact with humans,” Dr. Diel said.

Previous studies in deer have indicated that humans have continuously brought the coronavirus to white-tailed deer populations in the United States and Canada and that deer can transmit the virus to each other. Scientists don’t know how other people transmit the virus to deer. However, they have hypothesized that it could happen when other people feed deer or deer encounter human waste or waste.

The extent of the threat posed by inflamed deer to humans remains unclear. Scientists have documented a case where the maximum maximum likely resulted from deer-to-human transmission in Ontario, noting that hunters and others who have normal contact with the animals can simply potentially catch the virus.

For the new study, Dr. Diel and colleagues analyzed about 5500 tissue samples taken from deer killed by hunters in New York State between September and December of the years 2020 and 2021.

During the 2020 season, only 0. 6% of samples tested positive for the virus, a figure that rose to 21% in the 2021 season.

Genetic sequencing revealed that three other fear variants, Alpha, Gamma and Delta, were provided in deer in the 2021 season.

At the time, Delta was still prevalent among New York City’s human citizens. But Alpha and Gamma had still disappeared, especially in rural areas of the state where the inflamed deer were found.

The scientists also linked the genomic sequences of the viral samples they detected in deer to those collected from humans. In deer, all 3 variants had new mutations that differentiated them from human sequences. But alpha and gamma samples from deer diverged more particularly from human sequences. than the deer Delta samples, the researchers found.

Together, the findings suggest that Alpha and Gamma likely circulated among deer and accumulated new mutations for months after overflowing the human population, Mavens said.

“This supports the argument that deer may have lines or variants that no longer circulate among humans,” said Dr. Suresh Kuchipudi, a veterinary microbiologist at Pennsylvania State University, who was not involved in the new research.

The discovery only raises considerations that deer may be a source of new coronavirus variants that can spread to humans; It also raises the option that the virus could evolve in a way that poses a greater threat to wildlife, he added. “It can also end up fitting into an animal fitness problem,” Dr. Kuchipudi said.

The study highlights the need for continuous monitoring of wild deer populations, Dr. Kuchipudi and Dr. Diel said. Diel and his colleagues are preparing to analyze deer samples from the 2022 hunting season to determine whether the virus is still widespread among deer and which variants are likely circulating.

The Centers for Disease Control and Prevention recommends that deer hunters take basic precautions to reduce the risk of infection, wearing masks when handling hunting and washing their hands thoroughly afterward.

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